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Pumpkin Cheesecake Bites That Will Steal Your Fall Dessert Spotlight

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By :

Harmony

Published:

September 4, 2025

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Pumpkin cheesecake bites recipe with creamy texture and spiced crust.

Have you ever noticed how pumpkin spice seems to transform ordinary moments into cozy fall memories? These pumpkin cheesecake bites might just be the tastiest way to capture that autumn magic in bite-sized form. As someone who’s tested over 50 pumpkin recipes in my tiny kitchen (much to my family’s delight), I’ve found that nothing gets the same “wow” reaction as these creamy, perfectly spiced treats.

When the leaves start changing and sweater weather arrives, my kitchen naturally shifts to pumpkin mode. These pumpkin cheesecake bites have become my go-to when I need something impressive but don’t have hours to spend baking. They’re the perfect balance of rich cheesecake and warm pumpkin spice, all in a two-bite package that makes portion control actually possible (though I can’t promise you’ll stop at one!).

Whether you’re hosting a fall gathering, contributing to Thanksgiving dinner, or just craving something sweet on a Tuesday night, these little gems deliver big flavor without the fuss of a full-sized cheesecake.

Ingredients for Perfect Pumpkin Cheesecake Bites

Pumpkin cheesecake bites require simple ingredients that combine to create something truly special. Most of these items are probably already in your pantry during fall baking season!

Pumpkin cheesecake bites with cream cheese, spices, and mini graham crusts

For the graham cracker crust:

  • 1½ cups graham cracker crumbs (about 12 full sheets)
  • ¼ cup granulated sugar
  • 6 tablespoons unsalted butter, melted
  • ½ teaspoon ground cinnamon

For the pumpkin cheesecake filling:

  • 16 ounces cream cheese, softened (2 standard blocks)
  • ¾ cup granulated sugar
  • ¾ cup pumpkin puree (not pumpkin pie filling)
  • 2 large eggs
  • 1 teaspoon vanilla extract
  • 1½ teaspoons pumpkin pie spice
  • ¼ teaspoon salt
  • 2 tablespoons all-purpose flour

For topping (optional):

  • 1 cup whipped cream
  • Caramel sauce for drizzling
  • Crushed pecans

Don’t have graham crackers? Gingersnaps make an amazing substitute that adds extra spice. For a dairy-free version, use dairy-free cream cheese and coconut oil instead of butter. The beauty of these pumpkin dessert ideas is their flexibility!

Timing

  • Prep time: 20 minutes
  • Bake time: 22-25 minutes
  • Cooling time: 2 hours (minimum)
  • Total time: About 3 hours (mostly hands-off)

While these creamy pumpkin treats do need cooling time, the actual hands-on work is minimal—making them perfect for busy days when you still want a homemade dessert.

Step-by-Step Instructions for Pumpkin Cheesecake Bites

Preparing the Crust

  1. Preheat your oven to 325°F (165°C) and line a standard muffin tin with paper liners.
  2. In a medium bowl, combine graham cracker crumbs, sugar, melted butter, and cinnamon until the mixture resembles wet sand.
  3. Press about 1 tablespoon of the crust mixture firmly into the bottom of each muffin cup. (A shot glass or small measuring cup works perfectly for this!)
  4. Bake the crusts for 5 minutes, then remove from the oven and cool while preparing the filling.

Making the Filling

  1. In a large bowl, beat the softened cream cheese until smooth and fluffy, about 2 minutes.
  2. Add sugar and beat until well combined.
  3. Mix in the pumpkin puree, vanilla extract, pumpkin pie spice, and salt.
  4. Add eggs one at a time, mixing on low speed just until incorporated. Don’t overmix once the eggs are added—this can cause cracking!
  5. Sprinkle flour over the mixture and fold in gently until smooth.

Baking

  1. Fill each muffin cup with cheesecake batter, leaving about ¼ inch from the top.
  2. Bake for 22-25 minutes, until the centers are almost set but still slightly jiggly.
  3. Turn off the oven, crack the door open, and let the pumpkin cheesecake bites cool in the oven for 15 minutes (this helps prevent cracking).
  4. Remove from oven and cool completely at room temperature before refrigerating for at least 2 hours.

Pro tip: For extra-smooth pumpkin cheesecake bites, make sure all ingredients are at room temperature before mixing. Cold cream cheese can create lumps that never fully incorporate!

Nutritional Information

Each pumpkin cheesecake bite contains approximately:

  • Calories: 275
  • Protein: 4g
  • Carbohydrates: 25g
  • Fat: 18g
  • Fiber: 1g

The pumpkin in these festive fall recipes adds vitamin A and potassium, making these treats slightly more nutritious than standard cheesecake. Everything in moderation, right?

Equipment Needed for Pumpkin Cheesecake Bites

Creating these simple pumpkin cheesecake treats doesn’t require fancy equipment:

  • Standard 12-cup muffin tin
  • Paper muffin liners (parchment liners work best for easy removal)
  • Medium and large mixing bowls
  • Electric mixer (hand or stand)
  • Measuring cups and spoons
  • Rubber spatula
  • Optional: piping bag for adding whipped cream topping

While not essential, a food processor makes quick work of crushing graham crackers for the crust. No food processor? Place crackers in a zip-top bag and crush with a rolling pin!

Why You’ll Love This Pumpkin Cheesecake Bites Recipe

These quick holiday desserts have become my most-requested fall treat for good reason:

  • Perfect portion control—each bite is satisfying without the commitment of a full slice
  • Make-ahead friendly—actually taste better after a day in the refrigerator
  • Portable and party-ready—no cutting or serving plates needed
  • Customizable with different toppings for everyone’s preference
  • Freezer-friendly for longer storage

I love bringing these to potlucks because they’re sturdy enough to transport without damage and always disappear within minutes. The individual servings mean no messy cutting at the party, too!

Healthier Alternatives for Pumpkin Cheesecake Bites

Looking to make these pumpkin cheesecake bites fit your dietary needs? Try these swaps:

For lower-sugar versions:

  • Replace sugar with monk fruit sweetener or erythritol (use about 25% less)
  • Use sugar-free graham crackers for the crust

For gluten-free pumpkin cheesecake bites:

  • Substitute gluten-free graham crackers or crushed gluten-free gingersnaps
  • Swap the all-purpose flour with a 1:1 gluten-free flour blend

For lighter pumpkin cheesecake bites:

  • Use 1/3-less-fat cream cheese (avoid fat-free, which contains stabilizers that affect texture)
  • Replace half the cream cheese with Greek yogurt

The basic pumpkin cheesecake bites recipe is incredibly adaptable while maintaining that creamy, spiced flavor everyone loves.

Serving Suggestions for Pumpkin Cheesecake Bites

Take these easy fall desserts from good to unforgettable with creative serving ideas:

  • Create a topping bar with whipped cream, caramel sauce, crushed pecans, and white chocolate chips
  • Serve alongside hot apple cider or spiced chai for the ultimate autumn experience
  • Add a dollop of maple-infused whipped cream and a tiny gingerbread cookie for festive flair
  • Drizzle with bourbon caramel sauce for an adults-only variation
  • Arrange on a tiered stand with other mini desserts for a stunning display

For Thanksgiving, I place one pumpkin cheesecake bite on each dinner plate as a pre-dessert surprise. This simple touch always gets compliments and makes guests feel extra special!

Common Mistakes to Avoid When Making Pumpkin Cheesecake Bites

Even experienced bakers can run into issues with these creamy pumpkin treats. Here’s how to avoid the most common pitfalls:

  1. Overmixing the batter – Once you add the eggs, mix just until combined. Overmixing incorporates too much air, leading to puffing, cracking, and sinking.

  2. Opening the oven door during baking – Sudden temperature changes cause cracking. Resist the urge to peek!

  3. Using cold ingredients – Room temperature cream cheese, eggs, and pumpkin puree blend more smoothly. Cold ingredients create lumps that never fully incorporate.

  4. Using pumpkin pie filling instead of puree – They’re not interchangeable! Pie filling contains added sugar and spices that will throw off the recipe balance.

  5. Rushing the cooling process – Patience yields perfect pumpkin cheesecake bites. The gradual cooling and chilling time is essential for proper setting and flavor development.

Storing Tips for Pumpkin Cheesecake Bites

These pumpkin cheesecake bites actually improve with a little time in the refrigerator, making them perfect for planning ahead:

Refrigerator storage:
Place cooled pumpkin cheesecake bites in an airtight container and refrigerate for up to 5 days. Layer with parchment paper if stacking.

Freezer storage:
For longer keeping, freeze the untopped cheesecake bites for up to 3 months. Place them in a single layer on a baking sheet until frozen solid, then transfer to a freezer container or freezer bag.

Thawing and serving:
Thaw frozen pumpkin cheesecake bites overnight in the refrigerator. Add any toppings just before serving for the freshest presentation.

Travel tips:
When taking these festive fall recipes to a gathering, transport in a cooler with ice packs. Add toppings once you arrive for the best appearance.

Conclusion

These pumpkin cheesecake bites bring together everything we love about fall desserts—warm spices, creamy texture, and just enough sweetness—in a perfectly portioned package. They’re proof that the most memorable treats don’t have to be complicated or time-consuming.

What makes this pumpkin cheesecake bites recipe special is its versatility. Dress them up for a holiday gathering, pack them for a fall picnic, or enjoy them as a weeknight treat with a cup of coffee. The combination of a spiced graham crust with that silky pumpkin filling creates something truly crave-worthy.

I’d love to see your creations! Tag @HarmonyMeal on Instagram or drop a comment below with your experience or questions. And if pumpkin season has you inspired, check out our collection of fall comfort foods for more seasonal cooking ideas!

FAQs About Pumpkin Cheesecake Bites

Can I make these pumpkin cheesecake bites ahead of time?

Absolutely! These actually taste better when made 1–2 days ahead. Store them in the refrigerator and add any toppings just before serving.

Why did my pumpkin cheesecake bites crack?

Cracking usually happens from overmixing, baking at too high a temperature, or cooling too quickly. Try mixing less after adding eggs, checking your oven temperature with a thermometer, and cooling gradually as directed.

Can I use canned pumpkin pie filling instead of pumpkin puree?

No, these two products aren’t interchangeable for this pumpkin cheesecake bites recipe. Pumpkin pie filling contains added sugars and spices that will throw off the balance of flavors and sweetness.

How can I tell when my pumpkin cheesecake bites are done baking?

They’re ready when the edges are set but the centers still have a slight jiggle—similar to Jell-O. They’ll continue to set as they cool. If they’re completely firm in the oven, they’re overbaked.

Are these pumpkin cheesecake bites freezer-friendly?

Yes! Freeze them without toppings in an airtight container for up to 3 months. Thaw overnight in the refrigerator before serving.

Print

Pumpkin Cheesecake Bites That Will Steal Your Fall Dessert Spotlight

Creamy, perfectly spiced pumpkin cheesecake bites with a buttery graham cracker crust. The ideal fall dessert—portable, make-ahead friendly, and irresistibly delicious!

  • Author: Harmony
  • Prep Time: 20 minutes
  • Cook Time: 25 minutes
  • Total Time: 3 hours
  • Yield: 12 bites 1x
  • Category: Dessert
  • Method: Baking
  • Cuisine: American

Ingredients

Scale
  • Graham Cracker Crust:
  • 1½ cups graham cracker crumbs (about 12 full sheets)
  • ¼ cup granulated sugar
  • 6 tablespoons unsalted butter, melted
  • ½ teaspoon ground cinnamon
  • Pumpkin Cheesecake Filling:
  • 16 oz cream cheese, softened
  • ¾ cup granulated sugar
  • ¾ cup pumpkin puree (not pumpkin pie filling)
  • 2 large eggs
  • 1 teaspoon vanilla extract
  • 1½ teaspoons pumpkin pie spice
  • ¼ teaspoon salt
  • 2 tablespoons all-purpose flour
  • Optional Topping:
  • 1 cup whipped cream
  • Caramel sauce for drizzling
  • Crushed pecans

Instructions

  1. Preheat oven to 325°F (165°C). Line a 12-cup muffin tin with paper liners.
  2. In a bowl, combine graham cracker crumbs, sugar, melted butter, and cinnamon. Press about 1 tablespoon into each muffin cup.
  3. Bake crusts for 5 minutes. Remove from oven and cool while preparing the filling.
  4. In a large bowl, beat softened cream cheese until smooth. Add sugar and mix until combined.
  5. Mix in pumpkin puree, vanilla, pumpkin pie spice, and salt. Add eggs one at a time, mixing on low speed until just combined.
  6. Sprinkle flour over the mixture and gently fold in until smooth.
  7. Fill muffin cups almost to the top with batter. Bake for 22–25 minutes, until centers are slightly jiggly but edges are set.
  8. Turn off oven, crack the door, and let bites cool in oven for 15 minutes. Then cool completely at room temperature before refrigerating at least 2 hours.
  9. Top with whipped cream, caramel, and pecans just before serving if desired.

Notes

For a twist, substitute gingersnaps for graham crackers or use dairy-free alternatives. These bites freeze beautifully—just skip the topping until serving. Avoid overmixing after adding eggs to prevent cracks.

Nutrition

  • Serving Size: 1 cheesecake bite
  • Calories: 275
  • Sugar: 16g
  • Sodium: 170mg
  • Fat: 18g
  • Saturated Fat: 10g
  • Unsaturated Fat: 7g
  • Trans Fat: 0g
  • Carbohydrates: 25g
  • Fiber: 1g
  • Protein: 4g
  • Cholesterol: 60mg

Keywords: pumpkin cheesecake bites, mini pumpkin cheesecake, fall dessert, thanksgiving dessert, easy pumpkin recipe

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